In order to investigate changes in ocular temperature in rabbit eyes exposed to different frequencies (18 to 40 GHz) of quasi-millimeter waves, and millimeter waves (MMW). Pigmented rabbits were anesthetized with both general and topical anesthesia, and thermometer probes (0.5 mm in diameter) were inserted into their cornea (stroma), lens (nucleus) and vitreous (center of vitreous). The eyes were exposed unilaterally to 200 mW/cm² by horn antenna for 3 min at 18, 22 and 26.5 GHz using a K band exposure system or 26.5, 35 and 40 GHz using a Ka band exposure system. Changes in temperature of the cornea, lens and vitreous were measured with a fluoroptic thermometer. Since the ocular temperatures after exposure to 26.5 GHz generated by the K band and Ka band systems were similar, we assumed that experimental data from these 2 exposure systems were comparable. The highest ocular temperature was induced by 40 GHz MMW, followed by 35 GHz. The 26.5 and 22 GHz corneal temperatures were almost the same. The lowest temperature was recorded at 18 GHz. The elevation in ocular temperature in response to exposure to 200 mW/cm² MMW is dependent on MMW frequency. MMW exposure induced heat is conveyed not only to the cornea but also the crystalline lens.